Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857806.1_cds_XP_016513534.1_26069
CDS Infomation

[gene=LOC107830483] [db_xref=GeneID:107830483] [protein=phospholipase A1-Igamma3, chloroplastic-like] [protein_id=XP_016513534.1] [location=14724..16247] [gbkey=CDS]
Sequence

ATGGCTTCCTTTCAATTATCTCTCACCAATCCCAAACACAAAAGAAACCATACTTTTCGA
GAAGTTTTTCCATTATATTGTAAGACATTCAAAGCTAAAAACCTCTCTTTCTCAAGCAAA
ATAACTTCACCAAAATTGTCTAGCGATCTTTCTTTGAGACCTTCATCTCCTTCTATTTTA
GCACCTAAGAATACTACAATCCAACAATACGAAGAAGAGAAAAAACCCCTTTATGAAATG
TGGAGAGAAATCCAAGGGTTGAAAAATTGGGAAGGTTTACTTGACCCTATGAACTCTAAT
CTAAGAAAAGAAATCATTAGGTATGGTGAATTTGCACAATCTTGTTATGACTCATTTGAC
TATGATCCTCACTCTAAGTATTGTGGTACTTGCAAATATCAACCATCACATTTCTTTGAG
AAGCTCAACATGGTGAAAAAAGGGTATGAAATGAGGAGATATTTGTATGCAACTTCAAAT
ATTAATTTGCCAAATTTCTTTCAAAAGTCGAAAGATAGTATGGTTTGGAGTCAACACGCG
AATTGGATGGGATATGTAGCCGTAGCCACAGATCCCGTAGAAATTAAGCGCCTAGGGCGT
CGTGACATTGTTGTTGCATGGCGTGGCACGGTCACGTACCTAGAATGGCTCCATGACCTC
AAGGATATTTTGCACCCGGCTCATTTTCGTGATGATCCTAACATCAAGATCGAGTCAGGG
TTCTTCGATTTGTACACTCAGAAAGAAAATAGTTGTCACTATTGTTCATTTTCGGCTCGT
GAACAAATCTTAGCTGAGATTAATCGATTAATCGAAAAGTATGAAGGTGAAGAGGTGAGT
ATTACAATTACAGGGCATAGTCTTGGTGCAGCATTGGCTTTGTTAAGTGCTTATGATATA
GCTGAGATGAAGTTGAACATTTTACATAATGGTAAGTCTATAATTAAAAGAATTCCAATT
ACTGTTTTTTCATTTGCTGGCCCTAGGGTTGGAAATCTTAAATTTAAACAAAGATGTGAA
GAGCTAGGAATTAGGGTTTTGAGAGTGATAAATGTGCATGATAGAGTGCCAACTGTGCCT
GGAATTATTACAAATGAGAAATTTCAATTCCAAAAACAATTGGAAGAGATTGTTTCATTT
CCTTGGAGTTATGCTCATGTTGGGGTGGAATTAGCATTGGACCATCATCATTCTCCTTTT
CTAAAGCCCAATAATGATTTGGGCTGTGCACATAATCTTGAGGCCCATTTACACCTCGTC
GATGGCTACCACGGGAAGGACCGCGCGTTTTGCTCCGCCACGGGGAGGGATATCACGCTT
GTCAACAAGGATTCTAGTTTCTTGAAGGAGGACTATGGCGTGCCGCCGTTGTGGTGGCAA
GATGAGAACAAAGGCATGGTGAGGACTCCCGACGGACGGTGGGTGTTGCCGGAGAGGCCC
ATAATTGAGGCCCATCCACCAGATACGGCCCATCATTTTCAGCAAGTCCTAAAACTTGCT
AGGGCTAGATTACATTTACCATAG

Peptide Sequence

PEP ID

XP_016513534.1
PEP Infomation

PREDICTED: phospholipase A1-Igamma3, chloroplastic-like [Nicotiana tabacum]
Sequence

MASFQLSLTNPKHKRNHTFREVFPLYCKTFKAKNLSFSSKITSPKLSSDLSLRPSSPSIL
APKNTTIQQYEEEKKPLYEMWREIQGLKNWEGLLDPMNSNLRKEIIRYGEFAQSCYDSFD
YDPHSKYCGTCKYQPSHFFEKLNMVKKGYEMRRYLYATSNINLPNFFQKSKDSMVWSQHA
NWMGYVAVATDPVEIKRLGRRDIVVAWRGTVTYLEWLHDLKDILHPAHFRDDPNIKIESG
FFDLYTQKENSCHYCSFSAREQILAEINRLIEKYEGEEVSITITGHSLGAALALLSAYDI
AEMKLNILHNGKSIIKRIPITVFSFAGPRVGNLKFKQRCEELGIRVLRVINVHDRVPTVP
GIITNEKFQFQKQLEEIVSFPWSYAHVGVELALDHHHSPFLKPNNDLGCAHNLEAHLHLV
DGYHGKDRAFCSATGRDITLVNKDSSFLKEDYGVPPLWWQDENKGMVRTPDGRWVLPERP
IIEAHPPDTAHHFQQVLKLARARLHLP

Transcript Sequence

Gene sequence data has not been registered.